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Home / Events / GHTM Sessions | Bioinformatics: Genome-Scale Metabolic Modeling and Protozoan Pathogens

GHTM Sessions | Bioinformatics: Genome-Scale Metabolic Modeling and Protozoan Pathogens

March 30, 2026

📅 Date: 8 April 2026
🕒 Time: 14:00-16:00
📍 Location: ZOOM & ANFITEATRO 1

Protozoan parasites such as Trypanosoma cruzi, Leishmania, and Plasmodium face a major challenge in their life cycle: surviving and adapting within their hosts. Beyond evading the immune system, they must cope with nutrient limitations and maintain a functional metabolic network to sustain energy production and growth.

Metabolism is therefore a key target for drug discovery. Inhibiting essential metabolic enzymes can disrupt parasite survival and collapse their biological networks. However, studying metabolism at a system-wide level is experimentally challenging.

This GHTM session will explore how Systems Biology and genome-scale metabolic models (GEMs) enable computational reconstruction and analysis of metabolic networks using genomic data. These approaches allow simulation of metabolic fluxes, identification of essential genes and reactions, prediction of metabolic reprogramming, auxotrophies, and host–pathogen interactions.

Join us to discover how computational biology can generate new hypotheses and support the search for novel therapeutic targets in parasitic diseases.

About Bruno Ribeiro Pinto

Bruno Ribeiro Pinto is a postdoctoral researcher in the Department of Parasitology at the Instituto de Ciências Biomédicas II, at the Universidade de São Paulo (USP), in Brazil. He holds a Bachelor’s degree in Biochemistry from the Universidade Federal de São João del-Rei (2017), Minas Gerais, Brazil, and a PhD in Applied Biochemistry from the Universidade Federal de Viçosa (2023), also in Minas Gerais, Brazil. His academic and research trajectory has been focused on biochemistry, parasitology, and systems-level approaches to understanding biological processes in protozoan parasites. As a postdoctoral fellow at USP, he currently works under the supervision of Prof. Ariel Mariano Silber, contributing to research efforts in parasite biology, metabolism, and host–pathogen interactions. His work integrates experimental and computational approaches to investigate fundamental mechanisms of parasite survival, with potential applications in the identification of novel therapeutic targets.

About Dr. Bruno Ribeiro Pinto
  • Academic Background: Bachelor’s degree in Biochemistry, Federal University of São João del-Rei (UFSJ), Minas Gerais, Brazil, 2017; PhD in Applied Biochemistry, Federal University of Viçosa (UFV), Minas Gerais, Brazil, 2023.

  • Career Path: Postdoctoral Researcher, Department of Parasitology, Institute of Biomedical Sciences II, University of São Paulo (USP), Brazil; Academic trajectory centered on interdisciplinary training in biochemistry, parasitology, and computational biology approaches.

  • Research Focus: Research into the adaptive mechanisms of protozoan parasites within host environments; Study of parasite metabolism and its role in survival, growth, and host–pathogen interactions; Application of systems biology and bioinformatics tools, including genome-scale metabolic modeling (GEMs), to reconstruct and analyze metabolic networks; Identification of essential genes, metabolic vulnerabilities, and potential therapeutic targets to support drug discovery efforts against parasitic diseases.Tropical and Travel Medicine, Health of expatriates and humanitarian workers, Prevention and management of infectious diseases in mobile and vulnerable populations, including immunocompromised travellers.

  • Profiles:
    • CIÊNCIAVITAE

If you are a GHTM member, you will receive the details of the session by e-mail. If you are not a GHTM member and would like to join the session, please contact us at ghtm-info@ihmt.unl.pt.

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About GHTM

GHTM is a R&D Unit that brings together researchers with a track record in Tropical Medicine and International & Global Health. It aims at strengthening Portugal's role as a leading partner in the development and implementation of a global health research agenda. Our evidence-based interventions contribute to the promotion of equity in health and to improve the health of populations.

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Funding

UID/04413/2025 - DOI: 10.54499/UID/04413/2025

UID/PRR/04413/2025 - DOI: 10.54499/UID/PRR/04413/2025

UID/PRR2/04413/2025 - DOI: 10.54499/UID/PRR2/04413/2025

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